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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51496.1COG0842 ABC-type multidrug transport system, permease component. (261 aa)    
Predicted Functional Partners:
EAR49922.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.915
EAR50337.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.910
EAR51484.1
Nitroreductase family protein; COG0778 Nitroreductase.
  
    0.780
EAR50511.1
Nitroreductase family protein; COG0778 Nitroreductase.
  
    0.778
EAR51498.1
Multidrug ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.701
EAR51495.1
Hypothetical protein.
       0.589
EAR49953.1
Hypothetical protein.
  
 
 0.586
EAR51098.1
Multiple sugar-binding transport ATP-binding; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 
 0.586
EAR51497.1
Putative ABC-transporter transmembrane component; COG0842 ABC-type multidrug transport system, permease component.
    
  0.516
EAR49441.1
Putative cell surface polysaccharide export ABC-2 transporter permease protein; Similar to wzm1Y20833; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
    
  0.516
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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