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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51497.1Putative ABC-transporter transmembrane component; COG0842 ABC-type multidrug transport system, permease component. (269 aa)    
Predicted Functional Partners:
EAR52007.1
Capsular polysaccharide export ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
  
 0.986
EAR49443.1
Putative cell surface polysaccharide export ABC-2 transporter ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
  
 0.986
EAR51498.1
Multidrug ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
  0.964
EAR52586.1
COG3563 Capsule polysaccharide export protein.
  
  
 0.840
EAR52006.1
Capsular polysaccharide export inner-membrane protein,BexC/CtrB/KpsE family protein; COG3524 Capsule polysaccharide export protein.
  
 
 0.816
EAR49442.1
COG3524 Capsule polysaccharide export protein.
  
 
 0.816
EAR50114.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
  
 0.753
EAR52587.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.695
EAR49649.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.695
EAR49376.1
Hypothetical protein; COG0562 UDP-galactopyranose mutase.
  
    0.623
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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