STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51250.1COG3544 Uncharacterized protein conserved in bacteria. (449 aa)    
Predicted Functional Partners:
EAR49728.1
COG0346 Lactoylglutathione lyase and related lyases.
  
     0.514
EAR49932.1
COG0141 Histidinol dehydrogenase.
       0.509
EAR49933.1
Hypothetical protein; Belongs to the UPF0262 family.
       0.509
EAR49934.1
Arsenate reductase; COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.509
EAR51251.1
COG2010 Cytochrome c, mono- and diheme variants.
       0.480
EAR52978.1
Alpha-galactoside ABC transporter periplasmic solute-binding protein precursor; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
     0.478
EAR52878.1
Putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; COG1653 ABC-type sugar transport system, periplasmic component.
  
     0.400
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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