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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51260.1Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component. (157 aa)    
Predicted Functional Partners:
EAR51259.1
COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.964
EAR51261.1
Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
  0.886
EAR51262.1
Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating).
       0.737
EAR51258.1
Hypothetical protein; COG0524 Sugar kinases, ribokinase family.
       0.520
EAR52696.1
TRAP-T family transporter, DctM (12 TMs) subunit; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
   
  0.517
EAR52261.1
TRAP dicarboxylate transporter, DctM subunit, putative; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
   
  0.517
EAR51693.1
TRAP transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
   
  0.517
EAR52555.1
DedA family protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
   
  0.517
EAR53157.1
Probable transporter; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
   
  0.517
EAR50230.1
Putative permease protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
   
  0.517
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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