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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51290.1Hypothetical protein; COG1653 ABC-type sugar transport system, periplasmic component. (431 aa)    
Predicted Functional Partners:
EAR51289.1
COG1175 ABC-type sugar transport systems, permease components.
 
   0.944
EAR51288.1
ABC transporter, permease protein, MalFG family protein; COG0395 ABC-type sugar transport system, permease component.
 
  0.848
EAR51785.1
Putative sugar uptake ABC transporter permease protein; COG1175 ABC-type sugar transport systems, permease components.
  
   0.818
EAR51786.1
Putative sugar uptake ABC transporter permease protein; COG0395 ABC-type sugar transport system, permease component.
 
  0.805
EAR52114.1
COG1175 ABC-type sugar transport systems, permease components.
  
   0.796
EAR52113.1
Putative binding protein dependent transport protein; COG0395 ABC-type sugar transport system, permease component.
  
  0.784
EAR51868.1
COG0395 ABC-type sugar transport system, permease component.
  
  0.781
EAR51904.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
  
   0.781
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  
  0.774
EAR51957.1
COG1175 ABC-type sugar transport systems, permease components.
  
   0.766
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.