STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51119.1Hypothetical protein. (307 aa)    
Predicted Functional Partners:
EAR51118.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.867
EAR51120.1
Senescence marker protein-30 (SMP-30); COG3386 Gluconolactonase.
       0.773
EAR51121.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.752
EAR52302.1
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
    
  0.747
EAR52304.1
COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
    
  0.745
EAR49530.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.497
EAR50390.1
Hypothetical protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
  
    0.494
EAR50904.1
Hypothetical protein; COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
  
    0.494
EAR49796.1
Hypothetical protein; COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
  
    0.494
EAR51122.1
ABC sugar (xylose) transporter, periplasmic binding protein; COG4213 ABC-type xylose transport system, periplasmic component.
       0.488
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.