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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51143.1COG1175 ABC-type sugar transport systems, permease components. (322 aa)    
Predicted Functional Partners:
EAR51144.1
COG1653 ABC-type sugar transport system, periplasmic component.
 
  0.991
EAR51142.1
COG0395 ABC-type sugar transport system, permease component.
  0.969
EAR52046.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
  
  
 
0.924
EAR51141.1
Probable trehalosemaltose transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
   0.887
EAR51868.1
COG0395 ABC-type sugar transport system, permease component.
 
  0.870
EAR51903.1
COG0395 ABC-type sugar transport system, permease component.
 
  0.870
EAR52045.1
Hypothetical protein; COG0395 ABC-type sugar transport system, permease component.
 
  0.870
EAR52113.1
Putative binding protein dependent transport protein; COG0395 ABC-type sugar transport system, permease component.
 
  0.870
EAR51053.1
Hypothetical protein; COG0395 ABC-type sugar transport system, permease component.
 
  0.868
EAR50263.1
Maltose transport inner membrane protein; COG3833 ABC-type maltose transport systems, permease component.
  0.867
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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