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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR51144.1COG1653 ABC-type sugar transport system, periplasmic component. (497 aa)    
Predicted Functional Partners:
EAR51143.1
COG1175 ABC-type sugar transport systems, permease components.
 
  0.991
EAR52046.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
   
  0.938
EAR51142.1
COG0395 ABC-type sugar transport system, permease component.
 
  0.908
EAR51139.1
COG3119 Arylsulfatase A and related enzymes.
 
     0.854
EAR51145.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.834
EAR51146.1
Putative choline-sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
     0.796
EAR51141.1
Probable trehalosemaltose transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
   0.707
EAR51812.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
  
   0.703
EAR51813.1
Hypothetical protein; COG0395 ABC-type sugar transport system, permease component.
  
  0.674
EAR51814.1
Levansucrase; COG1621 Beta-fructosidases (levanase/invertase).
  
     0.674
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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