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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52066.1Putative transcriptional regulator protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. (196 aa)    
Predicted Functional Partners:
EAR52067.1
SecA DEAD domain protein/helicase, putative; COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase).
       0.634
EAR52068.1
SapC protein, putative.
       0.634
EAR51767.1
Chemotaxis MotA protein; COG1291 Flagellar motor component.
    
   0.473
EAR50725.1
COG1291 Flagellar motor component.
    
   0.473
EAR50331.1
Putative aldehyde dehydrogenase protein; COG1396 Predicted transcriptional regulators.
  
  0.452
EAR52069.1
Peptidase, M50 family protein; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
       0.445
EAR52070.1
GAF domain protein; COG0845 Membrane-fusion protein.
       0.445
EAR52071.1
Type I secretion target repeat protein; COG3210 Large exoproteins involved in heme utilization or adhesion.
       0.445
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.