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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52083.1ATPase, ParA type; COG1192 ATPases involved in chromosome partitioning. (392 aa)    
Predicted Functional Partners:
EAR52082.1
ParB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
 
 
 0.985
EAR50142.1
ParB-like nuclease; COG1475 Predicted transcriptional regulators.
 
 0.952
EAR51886.1
Replication protein, putative; COG1475 Predicted transcriptional regulators.
 
   0.890
EAR52081.1
Probable replication protein C.
 
   
 0.889
EAR53051.1
Chromosome partitioning protein parB; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
 
 
 0.825
EAR50140.1
RepA; COG5534 Plasmid replication initiator protein.
 
     0.677
EAR50848.1
PAS; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
 
 0.664
dnaA
Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
   
 
 0.553
EAR50393.1
Hypothetical protein; COG0593 ATPase involved in DNA replication initiation; Belongs to the DnaA family.
   
 
 0.484
EAR52084.1
Putative Glutathione-dependent formaldehyde dehydrogenase; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
       0.450
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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