Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAR52095.1Benzoate-coenzyme A ligase; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases. (547 aa)    
Predicted Functional Partners:
EAR52100.1
Hypothetical protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
 0.996
EAR52089.1
Thioesterase family protein; COG0824 Predicted thioesterase.
 
  
  0.978
EAR52097.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.958
EAR52098.1
Transcriptional regulator, MarR family protein; COG1846 Transcriptional regulators.
 
     0.956
EAR52096.1
COG1960 Acyl-CoA dehydrogenases.
 
 
  0.951
EAR52099.1
D-beta-hydroxybutyrate dehydrogenase, putative; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
  
  0.939
EAR52101.1
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.911
EAR52088.1
Endoribonuclease L-PSP family protein; COG0251 Putative translation initiation inhibitor, yjgF family.
 
 
  0.886
EAR52422.1
COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
   
 0.881
EAR52208.1
COG0331 (acyl-carrier-protein) S-malonyltransferase.
  
 
 0.873
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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