STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52112.1Hypothetical protein; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold. (299 aa)    
Predicted Functional Partners:
EAR52110.1
Hypothetical protein; COG0277 FAD/FMN-containing dehydrogenases.
       0.773
EAR52111.1
Oxidoreductase; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
       0.773
EAR52113.1
Putative binding protein dependent transport protein; COG0395 ABC-type sugar transport system, permease component.
       0.773
EAR52114.1
COG1175 ABC-type sugar transport systems, permease components.
       0.773
EAR52571.1
Amidohydrolase family superfamily protein; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
  
 
0.769
EAR51347.1
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
  0.735
EAR52062.1
Mandelate racemase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.619
EAR52116.1
Putative 4-hydroxyphenylacetate isomerase/decarboxylase; COG0684 Demethylmenaquinone methyltransferase.
 
     0.600
EAR52142.1
Probable transmembrane protein; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
    
  0.581
EAR50162.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
    
 0.573
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.