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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR52116.1Putative 4-hydroxyphenylacetate isomerase/decarboxylase; COG0684 Demethylmenaquinone methyltransferase. (252 aa)    
Predicted Functional Partners:
EAR52746.1
COG0684 Demethylmenaquinone methyltransferase.
  
     0.766
EAR52112.1
Hypothetical protein; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
     0.600
EAR52115.1
Sugar ABC transporter substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
       0.556
EAR51906.1
Hypothetical protein; COG4354 Predicted bile acid beta-glucosidase.
  
     0.539
EAR52117.1
Putative transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
       0.524
EAR51843.1
Hypothetical protein.
  
     0.512
EAR50415.1
COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.
    
   0.508
EAR50530.1
ATP-dependent RNA helicase, DEAD/DEAH box family protein; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.
    
   0.508
EAR50922.1
Putative ATP-dependent RNA helicase protein; COG0513 Superfamily II DNA and RNA helicases.
    
   0.508
EAR50918.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
  
     0.472
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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