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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49446.1PaxA, putative; COG2931 RTX toxins and related Ca2+-binding proteins. (369 aa)    
Predicted Functional Partners:
EAR50571.1
Type I secretion target repeat protein.
 
 
  0.948
EAR50584.1
Type I secretion target repeat protein; COG1866 Phosphoenolpyruvate carboxykinase (ATP).
  
 0.859
EAR49795.1
Hypothetical protein.
  
 0.849
EAR49404.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
 
 0.809
EAR50915.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
 
 0.800
EAR53163.1
Possible Zn-dependent metalloprotease; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
 
0.737
EAR50572.1
Type I secretion target repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
 
0.732
EAR52609.1
Type I secretion target repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
 
0.730
EAR49954.1
Possible secreted protease; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
 
0.730
EAR49444.1
Type I secretion target repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
 
0.729
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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