STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50114.1COG1596 Periplasmic protein involved in polysaccharide export. (375 aa)    
Predicted Functional Partners:
EAR52956.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 0.996
EAR49648.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 0.996
EAR49442.1
COG3524 Capsule polysaccharide export protein.
 
  
 0.961
EAR49441.1
Putative cell surface polysaccharide export ABC-2 transporter permease protein; Similar to wzm1Y20833; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.949
EAR52586.1
COG3563 Capsule polysaccharide export protein.
 
  
 0.909
EAR52006.1
Capsular polysaccharide export inner-membrane protein,BexC/CtrB/KpsE family protein; COG3524 Capsule polysaccharide export protein.
 
  
 0.893
EAR49443.1
Putative cell surface polysaccharide export ABC-2 transporter ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.868
EAR52007.1
Capsular polysaccharide export ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.863
EAR49452.1
Nucleotide sugar epimerase/dehydratase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
 
 0.853
EAR51196.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 0.803
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.