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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50138.1Hypothetical protein. (257 aa)    
Predicted Functional Partners:
EAR51074.1
Hypothetical protein; COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain.
 
 
   0.927
EAR51075.1
Hypothetical protein.
 
 
   0.924
EAR49552.1
Portal protein, HK97 family protein; COG4695 Phage-related protein.
 
   0.922
EAR51079.1
Major tail protein, TP901-1 family protein; COG5437 Predicted secreted protein.
 
 
   0.888
EAR51083.1
COG4653 Predicted phage phi-C31 gp36 major capsid-like protein.
 
 
 
 0.885
EAR51072.1
Hypothetical protein.
 
 
   0.866
EAR51082.1
Hypothetical protein.
 
 
   0.820
EAR51080.1
Hypothetical protein.
 
 
   0.793
EAR51081.1
Head-tail adaptor, putative.
 
   0.793
EAR51073.1
Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
  
 0.734
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.