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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50142.1ParB-like nuclease; COG1475 Predicted transcriptional regulators. (352 aa)    
Predicted Functional Partners:
EAR50141.1
ParA family ATPase; COG1192 ATPases involved in chromosome partitioning.
 
 0.989
EAR52083.1
ATPase, ParA type; COG1192 ATPases involved in chromosome partitioning.
 
 0.952
EAR51885.1
Replication protein; COG1192 ATPases involved in chromosome partitioning.
 
 0.945
EAR50814.1
Hypothetical protein; COG1192 ATPases involved in chromosome partitioning.
  
 
 0.812
EAR53050.1
COG1192 ATPases involved in chromosome partitioning.
  
 
 0.801
EAR50140.1
RepA; COG5534 Plasmid replication initiator protein.
  
     0.774
rsmG
Glucose-inhibited division protein B; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.773
EAR52081.1
Probable replication protein C.
  
   
 0.747
EAR52082.1
ParB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
     0.702
EAR49441.1
Putative cell surface polysaccharide export ABC-2 transporter permease protein; Similar to wzm1Y20833; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
     0.521
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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