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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR50145.1COG1216 Predicted glycosyltransferases. (321 aa)    
Predicted Functional Partners:
EAR49376.1
Hypothetical protein; COG0562 UDP-galactopyranose mutase.
 
    0.854
EAR49445.1
Hypothetical protein; COG0562 UDP-galactopyranose mutase.
 
    0.854
EAR49450.1
COG1216 Predicted glycosyltransferases.
 
  
 0.821
EAR49441.1
Putative cell surface polysaccharide export ABC-2 transporter permease protein; Similar to wzm1Y20833; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
    0.663
EAR49448.1
Hypothetical protein.
 
  
  0.657
EAR50144.1
Hypothetical protein; COG2378 Predicted transcriptional regulator.
 
     0.617
EAR50277.1
Mannose-6-phosphate isomerase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.610
EAR49442.1
COG3524 Capsule polysaccharide export protein.
 
     0.597
EAR49452.1
Nucleotide sugar epimerase/dehydratase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
 
 0.577
EAR50143.1
Hypothetical protein; COG0625 Glutathione S-transferase.
 
     0.478
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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