STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM08308.1Putative short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (331 aa)    
Predicted Functional Partners:
clpX
ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
  
   0.572
ADM10679.1
Hypothetical protein.
  
     0.530
ADM08317.1
Putative oxidoreductase.
  
     0.465
ADM09751.1
Major facilitator family transporter.
  
     0.460
ADM09545.1
Hypothetical protein.
   
   0.456
ADM10298.1
Acyl-carrier-protein S-malonyltransferase.
 
 
 0.456
ADM10390.1
Sulfatase.
   
   0.456
ADM09889.1
Putative two-component sensor.
    
 
 0.437
ADM10046.1
Hypothetical protein.
 
 
 0.435
ADM09314.1
AMP-dependent synthetase and ligase.
 
   0.432
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.