STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM08377.1Hypothetical protein. (560 aa)    
Predicted Functional Partners:
ADM08378.1
Chaperonin GroEL.
       0.773
ADM09357.1
TonB system biopolymer transport component.
 
  
 0.629
ADM09372.1
Hypothetical protein.
  
   0.613
ADM09362.1
Hypothetical protein.
  
 
   0.600
ADM09356.1
Hypothetical protein.
  
     0.589
ADM09361.1
Hypothetical tonB2 protein.
  
     0.587
ADM10513.1
Heavy metal RND efflux outer membrane protein, CzcC family protein.
  
     0.519
ADM09756.1
Putative outer membrane protein, TonB-dependent receptor.
  
     0.518
ADM10192.1
Putative lipoprotein.
   
 
 0.517
ADM09745.1
TonB-dependent receptor, putative.
  
     0.502
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.