STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM08692.1Hypothetical protein. (905 aa)    
Predicted Functional Partners:
ADM09583.1
TonB-dependent receptor.
  
  
 0.791
ADM10267.1
TonB-dependent receptor.
  
  
 0.772
ADM08521.1
Oar-like outer membrane protein protein, OmpA family protein.
  
     0.737
ADM09582.1
TPR domain protein.
  
     0.720
ADM09756.1
Putative outer membrane protein, TonB-dependent receptor.
  
  
 0.706
ADM08760.1
TonB-dependent receptor.
  
     0.705
ADM09768.1
Putative lipoprotein.
 
     0.693
ADM10224.1
Hypothetical protein.
  
     0.662
ADM10797.1
Uncharacterized conserved membrane protein.
 
     0.643
ADM09891.1
Hypothetical protein.
  
     0.639
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.