STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM08737.1Predicted carboxypeptidase, Zn dependent. (376 aa)    
Predicted Functional Partners:
ADM08365.1
Arginine/ornithine N-succinyltransferase beta subunit.
  
     0.637
map
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
       0.598
ADM08739.1
DNA repair protein RadC; Belongs to the UPF0758 family.
       0.598
ADM08736.1
Hypothetical protein.
       0.554
ADM10323.1
Hypothetical protein.
    
 0.495
ADM08867.1
Putative haloacid dehalogenase superfamily hydrolase.
 
     0.470
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
    0.468
ADM08735.1
Thio:disulfide interchange protein, putative.
       0.457
ADM08740.1
Hypothetical protein.
       0.447
ADM08741.1
Hypothetical protein.
       0.447
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.