STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM08790.1Putative conjugal transfer trbf transmembrane protein. (232 aa)    
Predicted Functional Partners:
ADM08791.1
Conjugal transfer protein trbL.
     0.948
ADM08789.1
Conjugal transfer protein trbG.
     0.947
ADM08788.1
Conjugal transfer protein trbI.
     0.945
ADM08793.1
Conjugal transfer protein trbe.
 
   
 0.944
ADM08794.1
Putative conjugal transfer trbd transmembrane protein.
 
   
 0.944
ADM08795.1
Putative conjugal transfer protein; TrbC.
 
   
 0.944
ADM08792.1
Conjugal transfer protein trbJ.
 
     0.943
ADM08797.1
Hypothetical protein.
 
     0.932
ADM08787.1
Hypothetical protein.
 
     0.924
ADM08798.1
Conjugal transfer protein traG.
 
     0.904
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.