STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM09197.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
ADM09198.1
Hypothetical protein.
 
     0.947
ADM09199.1
Hypothetical protein.
 
     0.872
ADM09195.1
Hypothetical protein.
 
     0.805
ADM08802.1
Hypothetical protein.
 
     0.788
ADM08800.1
Hypothetical protein.
 
     0.782
ADM08801.1
Plasmid transfer protein traf.
 
     0.781
ADM09208.1
Hypothetical protein.
 
     0.780
ADM08797.1
Hypothetical protein.
 
     0.779
ADM08792.1
Conjugal transfer protein trbJ.
  
     0.773
ADM09215.1
Possible conjugal transfer protein trbJ.
  
     0.771
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.