STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM09220.1Hypothetical protein. (78 aa)    
Predicted Functional Partners:
ADM09215.1
Possible conjugal transfer protein trbJ.
 
     0.896
ADM09213.1
Putative conjugal transfer trbd transmembrane protein.
 
     0.862
ADM09216.1
Putative conjugal transfer protein.
 
     0.852
ADM09221.1
Hypothetical protein.
 
     0.836
ADM09218.1
Conjugal transfer protein trbG.
 
     0.821
ADM09219.1
Conjugal transfer protein trbI.
 
     0.821
ADM09217.1
Conjugal transfer protein trbF.
 
     0.819
ADM09212.1
Conjugal transfer protein trbc.
 
     0.794
ADM09214.1
Conjugal transfer protein trbe.
 
     0.792
ADM09211.1
Conjugal transfer protein trbB.
       0.764
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.