STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM09670.1Phage prohead protease, HK97 family protein. (156 aa)    
Predicted Functional Partners:
ADM09671.1
Major capsid protein, HK97 family protein.
  
 0.984
ADM09668.1
Genetic exchange protein, putative.
 
   
 0.957
ADM09667.1
Phage DNA Packaging Protein.
 
     0.953
ADM09675.1
Hypothetical protein.
 
    0.915
ADM09672.1
Hypothetical protein.
 
   
 0.902
ADM09678.1
Hypothetical protein.
 
     0.868
ADM09679.1
Gene transfer agent-like protein.
 
     0.868
ADM09680.1
Hypothetical protein.
 
     0.868
ADM09681.1
Gene transfer agent (GTA) orfg15, like protein.
 
     0.868
ADM10310.1
Hypothetical protein.
 
   
 0.788
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.