STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM09675.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
ADM09672.1
Hypothetical protein.
 
   0.975
ADM09678.1
Hypothetical protein.
 
 
   0.969
ADM09668.1
Genetic exchange protein, putative.
 
   0.957
ADM09671.1
Major capsid protein, HK97 family protein.
 
   0.956
ADM09679.1
Gene transfer agent-like protein.
 
 
   0.942
ADM09681.1
Gene transfer agent (GTA) orfg15, like protein.
 
 
   0.942
ADM09674.1
Gene transfer agent-like protein.
   
   0.940
ADM09670.1
Phage prohead protease, HK97 family protein.
 
    0.915
ADM09667.1
Phage DNA Packaging Protein.
 
     0.912
ADM10310.1
Hypothetical protein.
 
 
   0.893
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.