Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADM08331.1 | ADM08871.1 | PB2503_01257 | PB2503_03982 | Nineteen domain light and oxygen sensing his kinase. | Two-component system response regulator. | 0.632 |
ADM08331.1 | ADM09185.1 | PB2503_01257 | PB2503_05562 | Nineteen domain light and oxygen sensing his kinase. | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | 0.744 |
ADM08331.1 | ADM09351.1 | PB2503_01257 | PB2503_06427 | Nineteen domain light and oxygen sensing his kinase. | Phosphate regulon response regulator PhoB. | 0.709 |
ADM08331.1 | ADM09684.1 | PB2503_01257 | PB2503_08144 | Nineteen domain light and oxygen sensing his kinase. | Two component response regulatorT. | 0.448 |
ADM08331.1 | ADM09685.1 | PB2503_01257 | PB2503_08149 | Nineteen domain light and oxygen sensing his kinase. | Putative sensor histidine kinase transmembrane protein. | 0.659 |
ADM08331.1 | ADM10489.1 | PB2503_01257 | PB2503_12234 | Nineteen domain light and oxygen sensing his kinase. | Hypothetical protein. | 0.535 |
ADM08331.1 | ADM10571.1 | PB2503_01257 | PB2503_12669 | Nineteen domain light and oxygen sensing his kinase. | Hypothetical protein. | 0.643 |
ADM08331.1 | ADM10838.1 | PB2503_01257 | PB2503_00355 | Nineteen domain light and oxygen sensing his kinase. | DNA-binding response regulator. | 0.523 |
ADM08331.1 | ADM10864.1 | PB2503_01257 | PB2503_00485 | Nineteen domain light and oxygen sensing his kinase. | Two-component response regulator. | 0.448 |
ADM08871.1 | ADM08331.1 | PB2503_03982 | PB2503_01257 | Two-component system response regulator. | Nineteen domain light and oxygen sensing his kinase. | 0.632 |
ADM08871.1 | ADM09185.1 | PB2503_03982 | PB2503_05562 | Two-component system response regulator. | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | 0.880 |
ADM08871.1 | ADM09685.1 | PB2503_03982 | PB2503_08149 | Two-component system response regulator. | Putative sensor histidine kinase transmembrane protein. | 0.688 |
ADM09185.1 | ADM08331.1 | PB2503_05562 | PB2503_01257 | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | Nineteen domain light and oxygen sensing his kinase. | 0.744 |
ADM09185.1 | ADM08871.1 | PB2503_05562 | PB2503_03982 | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | Two-component system response regulator. | 0.880 |
ADM09185.1 | ADM09351.1 | PB2503_05562 | PB2503_06427 | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | Phosphate regulon response regulator PhoB. | 0.904 |
ADM09185.1 | ADM09684.1 | PB2503_05562 | PB2503_08144 | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | Two component response regulatorT. | 0.740 |
ADM09185.1 | ADM09685.1 | PB2503_05562 | PB2503_08149 | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | Putative sensor histidine kinase transmembrane protein. | 0.673 |
ADM09185.1 | ADM10489.1 | PB2503_05562 | PB2503_12234 | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | Hypothetical protein. | 0.798 |
ADM09185.1 | ADM10571.1 | PB2503_05562 | PB2503_12669 | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | Hypothetical protein. | 0.890 |
ADM09185.1 | ADM10838.1 | PB2503_05562 | PB2503_00355 | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | DNA-binding response regulator. | 0.812 |
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