STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM09778.1Type II secretion system protein K. (342 aa)    
Predicted Functional Partners:
ADM09777.1
General secretion pathway protein J.
 
 
 0.998
ADM09776.1
Hypothetical protein.
  
 
 0.992
ADM09774.1
Type II secretion system protein G.
 
 
 0.985
ADM09775.1
General secretion pathway protein H.
  
 
 0.944
ADM09771.1
General secretion pathway protein D.
 
   
 0.942
ADM09770.1
Hypothetical protein.
 
  
 0.931
ADM09773.1
General secretion pathway protein F.
 
   
 0.903
ADM09772.1
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.901
ADM09779.1
Hypothetical protein.
  
  
 0.836
ADM09780.1
Hypothetical protein.
  
  
 0.833
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.