Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADM08247.1 | ADM08372.1 | PB2503_00832 | PB2503_01467 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.584 |
ADM08247.1 | ADM09816.1 | PB2503_00832 | PB2503_08804 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Hypothetical protein. | 0.557 |
ADM08372.1 | ADM08247.1 | PB2503_01467 | PB2503_00832 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.584 |
ADM08372.1 | ADM09816.1 | PB2503_01467 | PB2503_08804 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein. | 0.985 |
ADM08615.1 | ADM09405.1 | PB2503_02692 | PB2503_06697 | Riboflavin synthase subunit alpha. | 50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | 0.712 |
ADM08615.1 | ADM09816.1 | PB2503_02692 | PB2503_08804 | Riboflavin synthase subunit alpha. | Hypothetical protein. | 0.554 |
ADM08615.1 | rpmJ | PB2503_02692 | PB2503_02842 | Riboflavin synthase subunit alpha. | Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.712 |
ADM09405.1 | ADM08615.1 | PB2503_06697 | PB2503_02692 | 50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | Riboflavin synthase subunit alpha. | 0.712 |
ADM09405.1 | ADM09816.1 | PB2503_06697 | PB2503_08804 | 50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | Hypothetical protein. | 0.688 |
ADM09405.1 | rpmJ | PB2503_06697 | PB2503_02842 | 50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.993 |
ADM09815.1 | ADM09816.1 | PB2503_08799 | PB2503_08804 | Hypothetical protein. | Hypothetical protein. | 0.800 |
ADM09815.1 | ADM09818.1 | PB2503_08799 | PB2503_08814 | Hypothetical protein. | Exopolyphosphatase. | 0.752 |
ADM09815.1 | ppk | PB2503_08799 | PB2503_08809 | Hypothetical protein. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.752 |
ADM09815.1 | purM | PB2503_08799 | PB2503_08794 | Hypothetical protein. | Phosphoribosylaminoimidazole synthetase. | 0.581 |
ADM09815.1 | purN | PB2503_08799 | PB2503_08789 | Hypothetical protein. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.581 |
ADM09816.1 | ADM08247.1 | PB2503_08804 | PB2503_00832 | Hypothetical protein. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.557 |
ADM09816.1 | ADM08372.1 | PB2503_08804 | PB2503_01467 | Hypothetical protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.985 |
ADM09816.1 | ADM08615.1 | PB2503_08804 | PB2503_02692 | Hypothetical protein. | Riboflavin synthase subunit alpha. | 0.554 |
ADM09816.1 | ADM09405.1 | PB2503_08804 | PB2503_06697 | Hypothetical protein. | 50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | 0.688 |
ADM09816.1 | ADM09815.1 | PB2503_08804 | PB2503_08799 | Hypothetical protein. | Hypothetical protein. | 0.800 |
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