STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM09890.1DNA-binding response regulator. (213 aa)    
Predicted Functional Partners:
ADM09889.1
Putative two-component sensor.
 
 
 0.886
ADM09586.1
Sensor histidine kinase.
 
 
 0.868
ADM09891.1
Hypothetical protein.
 
    0.725
ADM08331.1
Nineteen domain light and oxygen sensing his kinase.
  
 
 0.608
ADM09601.1
Hypothetical protein.
  
 
 0.516
ADM09187.1
tRNA and rRNA cytosine-C5-methylase-like protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
     
 0.485
acsA
Putative acetyl-coenzyme a synthetase protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.482
ADM08330.1
Putative response regulatory protein.
 
 
 0.471
ADM09749.1
FOG: GGDEF domain protein.
  
 
 0.430
ADM08490.1
Sensory box sensor histidine kinase/response regulator.
  
 
 0.428
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.