STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM09934.1Hypothetical protein. (376 aa)    
Predicted Functional Partners:
ADM09935.1
Transcription factor jumonji, jmjC.
 
     0.951
ADM08631.1
Hypothetical protein.
  
     0.656
ADM08329.1
Hypothetical protein.
  
     0.619
ADM09149.1
Hypothetical protein.
  
     0.605
ADM08211.1
Hypothetical protein.
  
     0.558
ADM10164.1
Hypothetical protein.
  
     0.542
ADM08208.1
TraG.
  
     0.530
ADM08222.1
Putative conjugative transfer factor, TraB.
  
     0.501
ADM08216.1
Hypothetical protein.
  
     0.493
ADM09146.1
Pilus assembly protein prepilin peptidase subunit.
  
     0.465
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.