STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM10030.1Aminotransferase, class V. (386 aa)    
Predicted Functional Partners:
ADM08401.1
Hypothetical protein.
  
 0.999
ADM10053.1
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
   
 0.994
ADM10029.1
Rrf2 family protein.
  
 0.978
ADM08206.1
Hypothetical protein.
   
 0.972
ADM08988.1
Molybdenum cofactor biosynthesis protein MoeB.
   
 0.972
ADM10039.1
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
 
  
 0.969
ADM08689.1
Ferredoxin, 2Fe-2S.
 
 0.924
ADM10037.1
Aminotransferase, class V; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
0.899
ADM10033.1
ABC transporter, ATP-binding protein.
  
  
 0.849
ADM10031.1
Hypothetical protein.
  
  
 0.828
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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