STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM10037.1Aminotransferase, class V; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (407 aa)    
Predicted Functional Partners:
ADM10031.1
Hypothetical protein.
 
 0.998
ADM10033.1
ABC transporter, ATP-binding protein.
  
 0.998
ADM10034.1
Hypothetical protein.
 
 0.998
ADM10038.1
Hypothetical protein.
  
 0.987
ADM08706.1
Hypothetical protein.
 
 0.982
ADM08401.1
Hypothetical protein.
  
 
 0.957
ADM08448.1
Putative thioredoxin reductase.
  
 
 0.921
ADM09700.1
Thioredoxin reductase.
 
 
  0.915
ADM09652.1
Cystathionine gamma-synthase.
     
  0.900
ADM10030.1
Aminotransferase, class V.
    
0.899
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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