STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM10558.1Possible conjugal transfer protein TrbJ. (237 aa)    
Predicted Functional Partners:
ADM10559.1
Conjugal transfer protein trbL.
 
   
 0.947
ADM10560.1
Conjugal transfer protein.
 
     0.947
ADM10555.1
Conjugal transfer protein trbc.
 
   
 0.942
ADM10556.1
Putative conjugal transfer trbd transmembrane protein.
 
     0.942
ADM10557.1
Conjugal transfer protein trbe.
   
 0.941
ADM10561.1
Conjugal transfer protein TrbG.
 
   
 0.939
ADM10563.1
Hypothetical protein.
 
     0.931
ADM10564.1
Hypothetical protein.
 
     0.920
ADM10562.1
Conjugal transfer protein trbI.
 
   
 0.891
ADM08791.1
Conjugal transfer protein trbL.
 
   
 0.778
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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