Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADM08331.1 | ADM08490.1 | PB2503_01257 | PB2503_02057 | Nineteen domain light and oxygen sensing his kinase. | Sensory box sensor histidine kinase/response regulator. | 0.989 |
ADM08331.1 | ADM09185.1 | PB2503_01257 | PB2503_05562 | Nineteen domain light and oxygen sensing his kinase. | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | 0.744 |
ADM08331.1 | ADM09749.1 | PB2503_01257 | PB2503_08469 | Nineteen domain light and oxygen sensing his kinase. | FOG: GGDEF domain protein. | 0.651 |
ADM08331.1 | ADM09889.1 | PB2503_01257 | PB2503_09179 | Nineteen domain light and oxygen sensing his kinase. | Putative two-component sensor. | 0.932 |
ADM08331.1 | ADM09903.1 | PB2503_01257 | PB2503_09249 | Nineteen domain light and oxygen sensing his kinase. | Two-component hybrid sensor and regulator. | 0.525 |
ADM08331.1 | ADM10710.1 | PB2503_01257 | PB2503_13364 | Nineteen domain light and oxygen sensing his kinase. | Two-component hybrid sensor and regulator. | 0.985 |
ADM08331.1 | ADM10711.1 | PB2503_01257 | PB2503_13369 | Nineteen domain light and oxygen sensing his kinase. | Two-component response regulator. | 0.855 |
ADM08331.1 | ADM10712.1 | PB2503_01257 | PB2503_13374 | Nineteen domain light and oxygen sensing his kinase. | Sensor histidine kinase/response regulator. | 0.995 |
ADM08331.1 | ADM10716.1 | PB2503_01257 | PB2503_13394 | Nineteen domain light and oxygen sensing his kinase. | Sensor histidine kinase/response regulator. | 0.989 |
ADM08490.1 | ADM08331.1 | PB2503_02057 | PB2503_01257 | Sensory box sensor histidine kinase/response regulator. | Nineteen domain light and oxygen sensing his kinase. | 0.989 |
ADM08490.1 | ADM09185.1 | PB2503_02057 | PB2503_05562 | Sensory box sensor histidine kinase/response regulator. | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | 0.905 |
ADM08490.1 | ADM09749.1 | PB2503_02057 | PB2503_08469 | Sensory box sensor histidine kinase/response regulator. | FOG: GGDEF domain protein. | 0.941 |
ADM08490.1 | ADM09822.1 | PB2503_02057 | PB2503_08834 | Sensory box sensor histidine kinase/response regulator. | Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.939 |
ADM08490.1 | ADM09889.1 | PB2503_02057 | PB2503_09179 | Sensory box sensor histidine kinase/response regulator. | Putative two-component sensor. | 0.987 |
ADM08490.1 | ADM09903.1 | PB2503_02057 | PB2503_09249 | Sensory box sensor histidine kinase/response regulator. | Two-component hybrid sensor and regulator. | 0.905 |
ADM08490.1 | ADM10710.1 | PB2503_02057 | PB2503_13364 | Sensory box sensor histidine kinase/response regulator. | Two-component hybrid sensor and regulator. | 0.907 |
ADM08490.1 | ADM10711.1 | PB2503_02057 | PB2503_13369 | Sensory box sensor histidine kinase/response regulator. | Two-component response regulator. | 0.736 |
ADM08490.1 | ADM10712.1 | PB2503_02057 | PB2503_13374 | Sensory box sensor histidine kinase/response regulator. | Sensor histidine kinase/response regulator. | 0.909 |
ADM08490.1 | ADM10716.1 | PB2503_02057 | PB2503_13394 | Sensory box sensor histidine kinase/response regulator. | Sensor histidine kinase/response regulator. | 0.715 |
ADM09185.1 | ADM08331.1 | PB2503_05562 | PB2503_01257 | Signal-transducing histidine kinase; Probable PAS/PAC domain protein. | Nineteen domain light and oxygen sensing his kinase. | 0.744 |
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