Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ44033.1 | EAQ44155.1 | MED193_12778 | MED193_13388 | COG3741 N-formylglutamate amidohydrolase. | COG3758 Uncharacterized protein conserved in bacteria. | 0.446 |
EAQ44033.1 | EAQ45421.1 | MED193_12778 | MED193_01665 | COG3741 N-formylglutamate amidohydrolase. | Formiminoglutamate deiminase; COG0402 Cytosine deaminase and related metal-dependent hydrolases. | 0.751 |
EAQ44033.1 | EAQ45424.1 | MED193_12778 | MED193_01680 | COG3741 N-formylglutamate amidohydrolase. | COG3741 N-formylglutamate amidohydrolase. | 0.741 |
EAQ44033.1 | EAQ45426.1 | MED193_12778 | MED193_01690 | COG3741 N-formylglutamate amidohydrolase. | Histidine utilization repressor; COG2188 Transcriptional regulators. | 0.490 |
EAQ44033.1 | hutH | MED193_12778 | MED193_01675 | COG3741 N-formylglutamate amidohydrolase. | COG2986 Histidine ammonia-lyase. | 0.408 |
EAQ44033.1 | hutI | MED193_12778 | MED193_01670 | COG3741 N-formylglutamate amidohydrolase. | COG1228 Imidazolonepropionase and related amidohydrolases. | 0.706 |
EAQ44033.1 | hutU | MED193_12778 | MED193_01685 | COG3741 N-formylglutamate amidohydrolase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.457 |
EAQ44155.1 | EAQ44033.1 | MED193_13388 | MED193_12778 | COG3758 Uncharacterized protein conserved in bacteria. | COG3741 N-formylglutamate amidohydrolase. | 0.446 |
EAQ44155.1 | EAQ45421.1 | MED193_13388 | MED193_01665 | COG3758 Uncharacterized protein conserved in bacteria. | Formiminoglutamate deiminase; COG0402 Cytosine deaminase and related metal-dependent hydrolases. | 0.603 |
EAQ44155.1 | EAQ45424.1 | MED193_13388 | MED193_01680 | COG3758 Uncharacterized protein conserved in bacteria. | COG3741 N-formylglutamate amidohydrolase. | 0.587 |
EAQ44155.1 | EAQ45426.1 | MED193_13388 | MED193_01690 | COG3758 Uncharacterized protein conserved in bacteria. | Histidine utilization repressor; COG2188 Transcriptional regulators. | 0.754 |
EAQ44155.1 | hutH | MED193_13388 | MED193_01675 | COG3758 Uncharacterized protein conserved in bacteria. | COG2986 Histidine ammonia-lyase. | 0.562 |
EAQ44155.1 | hutI | MED193_13388 | MED193_01670 | COG3758 Uncharacterized protein conserved in bacteria. | COG1228 Imidazolonepropionase and related amidohydrolases. | 0.578 |
EAQ44155.1 | hutU | MED193_13388 | MED193_01685 | COG3758 Uncharacterized protein conserved in bacteria. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.654 |
EAQ44410.1 | hutH | MED193_10488 | MED193_01675 | COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | COG2986 Histidine ammonia-lyase. | 0.488 |
EAQ44410.1 | hutU | MED193_10488 | MED193_01685 | COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.509 |
EAQ45421.1 | EAQ44033.1 | MED193_01665 | MED193_12778 | Formiminoglutamate deiminase; COG0402 Cytosine deaminase and related metal-dependent hydrolases. | COG3741 N-formylglutamate amidohydrolase. | 0.751 |
EAQ45421.1 | EAQ44155.1 | MED193_01665 | MED193_13388 | Formiminoglutamate deiminase; COG0402 Cytosine deaminase and related metal-dependent hydrolases. | COG3758 Uncharacterized protein conserved in bacteria. | 0.603 |
EAQ45421.1 | EAQ45424.1 | MED193_01665 | MED193_01680 | Formiminoglutamate deiminase; COG0402 Cytosine deaminase and related metal-dependent hydrolases. | COG3741 N-formylglutamate amidohydrolase. | 0.987 |
EAQ45421.1 | EAQ45426.1 | MED193_01665 | MED193_01690 | Formiminoglutamate deiminase; COG0402 Cytosine deaminase and related metal-dependent hydrolases. | Histidine utilization repressor; COG2188 Transcriptional regulators. | 0.767 |
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