Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ43754.1htrA suppressor protein sohA, putative; COG2002 Regulators of stationary/sporulation gene expression. (108 aa)    
Predicted Functional Partners:
EAQ43753.1
Hypothetical protein.
 
 
 0.997
EAQ43708.1
Plasmid stabilization system; COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system.
    
 0.777
EAQ43675.1
COG4680 Uncharacterized protein conserved in bacteria.
     
 0.772
EAQ43676.1
Hypothetical protein; COG5499 Predicted transcription regulator containing HTH domain.
     
 0.772
EAQ43751.1
Hypothetical protein.
    
 0.769
EAQ43931.1
Transcriptional regulator, XRE family protein; COG2944 Predicted transcriptional regulator.
    
 0.755
EAQ43756.1
Hypothetical protein.
 
     0.748
EAQ43932.1
RelE-like Cytotoxic translational repressor of toxin-antitoxin stability system; COG4737 Uncharacterized protein conserved in bacteria.
    
 0.736
EAQ43747.1
Hypothetical protein.
  
     0.715
EAQ43755.1
Hypothetical protein.
 
     0.703
Your Current Organism:
Roseobacter sp. MED193
NCBI taxonomy Id: 314262
Other names: R. sp. MED193
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