Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ45054.1 | EAQ45055.1 | MED193_04471 | MED193_04476 | Hypothetical protein. | Kinase, pfkB family protein; COG0524 Sugar kinases, ribokinase family. | 0.677 |
EAQ45054.1 | EAQ45057.1 | MED193_04471 | MED193_04486 | Hypothetical protein. | Hypothetical protein. | 0.501 |
EAQ45054.1 | psuG | MED193_04471 | MED193_04481 | Hypothetical protein. | Indigoidine synthase A family protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | 0.681 |
EAQ45055.1 | EAQ45054.1 | MED193_04476 | MED193_04471 | Kinase, pfkB family protein; COG0524 Sugar kinases, ribokinase family. | Hypothetical protein. | 0.677 |
EAQ45055.1 | EAQ45057.1 | MED193_04476 | MED193_04486 | Kinase, pfkB family protein; COG0524 Sugar kinases, ribokinase family. | Hypothetical protein. | 0.715 |
EAQ45055.1 | psuG | MED193_04476 | MED193_04481 | Kinase, pfkB family protein; COG0524 Sugar kinases, ribokinase family. | Indigoidine synthase A family protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | 0.993 |
EAQ45057.1 | EAQ45054.1 | MED193_04486 | MED193_04471 | Hypothetical protein. | Hypothetical protein. | 0.501 |
EAQ45057.1 | EAQ45055.1 | MED193_04486 | MED193_04476 | Hypothetical protein. | Kinase, pfkB family protein; COG0524 Sugar kinases, ribokinase family. | 0.715 |
EAQ45057.1 | EAQ45678.1 | MED193_04486 | MED193_08493 | Hypothetical protein. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.496 |
EAQ45057.1 | psuG | MED193_04486 | MED193_04481 | Hypothetical protein. | Indigoidine synthase A family protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | 0.717 |
EAQ45678.1 | EAQ45057.1 | MED193_08493 | MED193_04486 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Hypothetical protein. | 0.496 |
psuG | EAQ45054.1 | MED193_04481 | MED193_04471 | Indigoidine synthase A family protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | Hypothetical protein. | 0.681 |
psuG | EAQ45055.1 | MED193_04481 | MED193_04476 | Indigoidine synthase A family protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | Kinase, pfkB family protein; COG0524 Sugar kinases, ribokinase family. | 0.993 |
psuG | EAQ45057.1 | MED193_04481 | MED193_04486 | Indigoidine synthase A family protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | Hypothetical protein. | 0.717 |