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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ45100.1Putative diguanylate cyclase (GGDEF domain); COG2199 FOG: GGDEF domain. (300 aa)    
Predicted Functional Partners:
EAQ46008.1
PAS sensor Signal Tranduction Histidine Kinase; COG2202 FOG: PAS/PAC domain.
 
 0.965
EAQ46786.1
Putative sensory transduction histidine kinase of highly complex domain structure; COG0642 Signal transduction histidine kinase.
 
 0.963
EAQ45427.1
Two-component hybrid sensor and regulator; COG2202 FOG: PAS/PAC domain.
 
 0.956
EAQ46982.1
Sensory box histidine kinase/response regulator hybrid; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 0.951
EAQ47416.1
Sensor histidine kinase with PAS/PAC and Response regulator receiver domains; COG0642 Signal transduction histidine kinase.
 
 0.947
EAQ45589.1
PAS; COG0642 Signal transduction histidine kinase.
 
 0.910
EAQ45532.1
Sensory box sensor histidine kinase/response regulator; COG3452 Predicted periplasmic ligand-binding sensor domain.
 
 0.902
EAQ44445.1
COG2200 FOG: EAL domain.
 
 0.887
EAQ46889.1
Diguanylate cyclase, putative; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 0.873
EAQ47410.1
Sensory box sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
 
 0.859
Your Current Organism:
Roseobacter sp. MED193
NCBI taxonomy Id: 314262
Other names: R. sp. MED193
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