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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ46146.1COG0546 Predicted phosphatases. (220 aa)    
Predicted Functional Partners:
EAQ45624.1
COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit; Belongs to the RuBisCO large chain family.
    
 0.880
EAQ46871.1
HAD-superfamily hydrolase, subfamily IA, variant 1; COG0546 Predicted phosphatases.
  
  
 
0.873
EAQ45711.1
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; COG0546 Predicted phosphatases.
  
  
  0.869
EAQ46655.1
Glycolate oxidase, GlcE subunit; COG0277 FAD/FMN-containing dehydrogenases.
    
 0.857
EAQ46656.1
Glycolate oxidase, iron-sulfur subunit; COG0247 Fe-S oxidoreductase.
    
 0.857
EAQ46253.1
Hypothetical protein; COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases.
 
  
 0.789
EAQ46654.1
Glycolate oxidase, GlcD subunit; COG0277 FAD/FMN-containing dehydrogenases.
    
 0.789
EAQ47336.1
COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.782
EAQ47581.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein; COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.782
EAQ44235.1
COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases.
    
 0.736
Your Current Organism:
Roseobacter sp. MED193
NCBI taxonomy Id: 314262
Other names: R. sp. MED193
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