STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ45516.1Hypothetical protein; COG3000 Sterol desaturase. (343 aa)    
Predicted Functional Partners:
EAQ45515.1
Hypothetical protein.
 
     0.879
EAQ45008.1
Hypothetical protein; COG1562 Phytoene/squalene synthetase.
  
 0.843
EAQ46554.1
COG1511 Predicted membrane protein.
   
 0.820
EAQ47704.1
Hypothetical protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
   
 0.541
EAQ44036.1
Ferric iron ABC transporter, periplasmic ferric iron-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
      0.536
EAQ47503.1
Hypothetical protein; COG0671 Membrane-associated phospholipid phosphatase.
    
  0.526
EAQ47307.1
Succinoglycan biosynthesis protein; COG1525 Micrococcal nuclease (thermonuclease) homologs.
   
    0.523
EAQ47683.1
Hypothetical protein; COG1525 Micrococcal nuclease (thermonuclease) homologs.
   
    0.523
EAQ43875.1
COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
   
 0.497
EAQ43878.1
Monooxygenase, FAD-binding; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
   
 0.497
Your Current Organism:
Roseobacter sp. MED193
NCBI taxonomy Id: 314262
Other names: R. sp. MED193
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.