STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ45712.1Hypothetical protein; COG0611 Thiamine monophosphate kinase. (94 aa)    
Predicted Functional Partners:
EAQ45711.1
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; COG0546 Predicted phosphatases.
 
     0.803
EAQ45713.1
Diguanylate cyclase, putative/response regulator; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
       0.723
EAQ47650.1
Hypothetical protein.
  
     0.487
EAQ47360.1
COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis.
  
     0.481
EAQ47104.1
Hypothetical protein.
  
     0.451
EAQ44396.1
Helicase, ATP-dependent, putative; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
  
     0.446
EAQ47565.1
Hypothetical protein.
  
     0.439
EAQ44506.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.435
EAQ46792.1
COG3216 Uncharacterized protein conserved in bacteria.
  
     0.410
Your Current Organism:
Roseobacter sp. MED193
NCBI taxonomy Id: 314262
Other names: R. sp. MED193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.