Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ43445.1Hypothetical protein; COG4942 Membrane-bound metallopeptidase. (382 aa)    
Predicted Functional Partners:
EAQ44433.1
Cell division permease protein FtsX, putative.
 
 
 
 0.971
EAQ43444.1
Carboxyl-terminal protease family protein; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
  
  
 0.938
EAQ44434.1
Cell division ATP-binding protein FtsE; COG2884 Predicted ATPase involved in cell division.
 
 
 
 0.914
EAQ47732.1
N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase.
 
 
 
 0.880
EAQ46982.1
Sensory box histidine kinase/response regulator hybrid; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
    
  0.828
EAQ47416.1
Sensor histidine kinase with PAS/PAC and Response regulator receiver domains; COG0642 Signal transduction histidine kinase.
    
  0.828
gpmI
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.793
EAQ44576.1
Probable chemoreceptor (methyl-accepting chemotaxis) transmembrane protein; COG5278 Predicted periplasmic ligand-binding sensor domain.
     
  0.722
EAQ46008.1
PAS sensor Signal Tranduction Histidine Kinase; COG2202 FOG: PAS/PAC domain.
    
 0.687
EAQ45427.1
Two-component hybrid sensor and regulator; COG2202 FOG: PAS/PAC domain.
    
  0.686
Your Current Organism:
Roseobacter sp. MED193
NCBI taxonomy Id: 314262
Other names: R. sp. MED193
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