STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ47147.1COG3485 Protocatechuate 3,4-dioxygenase beta subunit. (208 aa)    
Predicted Functional Partners:
EAQ47148.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
0.999
EAQ43886.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
0.982
EAQ47149.1
4-carboxymuconolactone decarboxylase; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
 
 0.962
EAQ43888.1
3-carboxy-cis,cis-muconate cycloisomerase; COG0015 Adenylosuccinate lyase.
 
 
 0.955
EAQ43884.1
4-hydroxybenzoate 3-monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
  
 0.941
EAQ44523.1
4-hydroxybenzoate 3-monooxygenase; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
  
 0.940
EAQ47068.1
3-carboxy-cis,cis-muconate cycloisomerase; COG0015 Adenylosuccinate lyase.
 
 
 0.902
EAQ43885.1
4-carboxymuconolactone decarboxylase; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
 
 0.854
EAQ47146.1
Hypothetical protein.
 
     0.825
EAQ47070.1
3-oxoadipate enol-lactone hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
  
 0.762
Your Current Organism:
Roseobacter sp. MED193
NCBI taxonomy Id: 314262
Other names: R. sp. MED193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.