STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ47375.1Hypothetical protein. (216 aa)    
Predicted Functional Partners:
EAQ47374.1
Hypothetical protein.
 
     0.967
EAQ47376.1
COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family.
 
     0.890
EAQ47372.1
Renal dipeptidase family protein; COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
 
     0.866
EAQ47370.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.825
EAQ47371.1
COG1012 NAD-dependent aldehyde dehydrogenases.
 
     0.749
EAQ47373.1
COG1292 Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
 
     0.658
Your Current Organism:
Roseobacter sp. MED193
NCBI taxonomy Id: 314262
Other names: R. sp. MED193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.