STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ47391.1Hypothetical protein. (318 aa)    
Predicted Functional Partners:
EAQ45327.1
Mannose-6-phosphate isomerase, type II; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.676
EAQ44257.1
Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.
   
 
 0.565
EAQ47392.1
Probable aggregation factor core protein MAFp3, isoform C; COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins.
       0.532
EAQ46612.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.523
EAQ44265.1
Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
 
 0.503
EAQ46092.1
LysM domain/M23/M37 peptidase; COG0739 Membrane proteins related to metalloendopeptidases.
   
  
 0.438
EAQ46548.1
COG0514 Superfamily II DNA helicase.
    
 
 0.424
EAQ46637.1
Hypothetical protein.
 
 
  0.420
EAQ46638.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
  0.407
EAQ46254.1
Nucleotidyltransferase family protein; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
 0.406
Your Current Organism:
Roseobacter sp. MED193
NCBI taxonomy Id: 314262
Other names: R. sp. MED193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.