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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ47477.1MMPL family membrane protein; COG4258 Predicted exporter. (731 aa)    
Predicted Functional Partners:
EAQ47474.1
(3R)-hydroxymyristoyl-acyl-carrier-protein dehydratase, putative.
 
   
 0.952
EAQ47475.1
Beta-ketoacyl synthase domain protein.
 
     0.951
EAQ47479.1
Putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis; COG4261 Predicted acyltransferase.
 
  
 0.939
EAQ47476.1
COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.927
EAQ47482.1
Glycosyl transferase, group 2 family protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    0.892
fabG
3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.827
EAQ47485.1
Hypothetical protein; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
 
     0.823
EAQ47487.1
COG0236 Acyl carrier protein.
 
   
 0.807
EAQ47481.1
Hypothetical protein.
 
     0.804
EAQ47478.1
Hypothetical protein.
       0.773
Your Current Organism:
Roseobacter sp. MED193
NCBI taxonomy Id: 314262
Other names: R. sp. MED193
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