Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ23752.1Type IV secretion system coupling protein; COG3505 Type IV secretory pathway, VirD4 components. (643 aa)    
Predicted Functional Partners:
EAQ23751.1
T-DNA border endonuclease; COG3843 Type IV secretory pathway, VirD2 components (relaxase).
 
   
 0.942
EAQ23764.1
Type IV secretion system protein B10, putative; COG0845 Membrane-fusion protein.
 
 
 
 0.858
EAQ22913.1
Conjugal transfer protein; COG2948 Type IV secretory pathway, VirB10 components.
 
 
 
 0.854
EAQ24742.1
Type IV secretion system protein B10, putative; COG2948 Type IV secretory pathway, VirB10 components.
 
 
 
 0.824
EAQ23771.1
Type IV secretion system protein B4, putative; COG3451 Type IV secretory pathway, VirB4 components.
 
  
 0.798
EAQ22918.1
Type IV secretion system protein B4, putative; COG3451 Type IV secretory pathway, VirB4 components.
 
  
 0.797
EAQ23765.1
Conjugal transfer protein, trbG; COG3504 Type IV secretory pathway, VirB9 components.
 
   
 0.795
EAQ24734.1
Type IV secretion system protein B4, putative; COG3451 Type IV secretory pathway, VirB4 components.
 
  
 0.795
EAQ22914.1
Conjugal transfer protein, trbG; COG3504 Type IV secretory pathway, VirB9 components.
 
   
 0.795
EAQ23766.1
COG3736 Type IV secretory pathway, component VirB8.
 
   
 0.794
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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