STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23753.1YeeC-like protein. (396 aa)    
Predicted Functional Partners:
EAQ23754.1
Hypothetical protein; COG1061 DNA or RNA helicases of superfamily II.
 
  
 0.971
EAQ23755.1
MloB; COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen.
 
    0.936
EAQ23756.1
Hypothetical protein.
 
  
 0.877
EAQ27482.1
Hypothetical protein; COG3593 Predicted ATP-dependent endonuclease of the OLD family.
  
    0.873
EAQ23760.1
Putative DNA methylase; COG1002 Type II restriction enzyme, methylase subunits.
 
    0.863
EAQ23149.1
Hypothetical protein.
  
    0.533
EAQ26794.1
COG4889 Predicted helicase.
  
  
 0.478
EAQ25511.1
Possible outer membrane protein.
   
    0.474
EAQ25512.1
Possible outer membrane protein.
   
    0.474
EAQ26237.1
Hypothetical protein.
   
    0.474
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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